Package: epiR
Version: 3.0.0
Date: 2026-10-13
Title: Tools for the Analysis of Epidemiological Data
Authors@R: c(person(given = "Mark", family = "Stevenson", role = c("aut", "cre"), email = "mark.stevenson1@unimelb.edu.au", comment = c(ORCID = "0000-0003-1890-9784")),
   person(given = "Evan", family = "Sergeant", role = "aut", email = "evansergeant@gmail.com"),
   person(given = "Cord", family = "Heuer", role = "ctb"),
   person(given = "Ian",  family = "Kopacka", role = "ctb"),
   person(given = "Klemens", family = "Fuchs", role = "ctb"),   
   person(given = "Telmo", family = "Nunes", role = "ctb"),
   person(given = "Cord", family = "Heuer", role = "ctb"),
   person(given = "Jonathon", family = "Marshall", role = "ctb"),
   person(given = "Javier", family = "Sanchez", role = "ctb"),
   person(given = "Ron", family = "Thornton", role = "ctb"),
   person(given = "Jeno", family = "Reiczigel", role = "ctb"),
   person(given = "Jim", family = "Robison-Cox", role = "ctb"),
   person(given = "Paola", family = "Sebastiani", role = "ctb"),
   person(given = "Peter", family = "Solymos", role = "ctb"),
   person(given = "Kazuki", family = "Yoshida", role = "ctb"),
   person(given = "Geoff", family = "Jones", role = "ctb"),
   person(given = "Sarah", family = "Pirikahu", role = "ctb"),
   person(given = "Simon", family = "Firestone", role = "ctb"),
   person(given = "Ryan", family = "Kyle", role = "ctb"),
   person(given = "Johann", family = "Popp", role = "ctb"),
   person(given = "Mathew", family = "Jay", role = "ctb"),
   person(given = "Allison", family = "Cheung", role = "ctb"),
   person(given = "Nagendra", family = "Singanallur", role = "ctb"),
   person(given = "Aniko", family = "Szabo", role = "ctb"),
   person(given = "Ahmad", family = "Rabiee", role = "ctb"))
Maintainer: Mark Stevenson <mark.stevenson1@unimelb.edu.au>
Description: Tools for the analysis of epidemiological and surveillance
        data. Contains functions for directly and indirectly adjusting
        measures of disease frequency, quantifying measures of
        association on the basis of single or multiple strata of count
        data presented in a contingency table, computation of
        confidence intervals around incidence risk and incidence rate
        estimates and sample size calculations for cross-sectional,
        case-control and cohort studies. Surveillance tools include
        functions to calculate an appropriate sample size for 1- and
        2-stage representative freedom surveys, functions to estimate
        surveillance system sensitivity and functions to support
        scenario tree modelling analyses.
Depends: R (>= 3.0.0), survival
Imports: BiasedUrn, pander, methods, sf, lubridate, zoo, flextable,
        stats, officer, DFBA
Suggests: MASS (>= 3.1-20), dplyr, foreign, ggplot2, knitr, rmarkdown,
        bookdown, plyr, RColorBrewer, scales, sp, spData (>= 2.3.0),
        spatstat, tidyr
VignetteBuilder: knitr
Encoding: UTF-8
License: GPL (>= 2)
Packaged: 2026-10-13 12:24:59 UTC; root
RoxygenNote: 7.1.0
NeedsCompilation: no
Author: Mark Stevenson [aut, cre] (ORCID:
        <https://orcid.org/0000-0003-1890-9784>), Evan Sergeant [aut],
        Cord Heuer [ctb], Ian Kopacka [ctb], Klemens Fuchs [ctb], Telmo
        Nunes [ctb], Cord Heuer [ctb], Jonathon Marshall [ctb], Javier
        Sanchez [ctb], Ron Thornton [ctb], Jeno Reiczigel [ctb], Jim
        Robison-Cox [ctb], Paola Sebastiani [ctb], Peter Solymos [ctb],
        Kazuki Yoshida [ctb], Geoff Jones [ctb], Sarah Pirikahu [ctb],
        Simon Firestone [ctb], Ryan Kyle [ctb], Johann Popp [ctb],
        Mathew Jay [ctb], Allison Cheung [ctb], Nagendra Singanallur
        [ctb], Aniko Szabo [ctb], Ahmad Rabiee [ctb]
Config/pak/sysreqs: libabsl-dev libcairo2-dev cmake libfontconfig1-dev
        libfreetype6-dev libfribidi-dev libgdal-dev gdal-bin
        libgeos-dev make libharfbuzz-dev libicu-dev libjpeg-dev
        libpng-dev libtiff-dev libuv1-dev libwebp-dev libxml2-dev
        libssl-dev libproj-dev libsqlite3-dev libudunits2-dev
Repository: https://markstevenson1.r-universe.dev
Date/Publication: 2026-10-13 02:30:02 UTC
RemoteUrl: https://github.com/cran/epiR
RemoteRef: HEAD
RemoteSha: c4ce7bd77cd00de8dffc93817662ac5c5f4a060b